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 MS Repo
 MS Repo brochure
Organize, analyze, and share protein data from MALDI MS
Organize, analyze, and share MS results
MS Repo is a lab information management system (LIMS) that helps workgroups organize,
analyze, and share MALDI mass spectrometry results. From submitting mass spec analysis orders
to creating protein hit lists, MS Repo supports day-today activities in your lab with minimal overhead.
MS Repo makes it easy to conform to publication guidelines of leading journals with its powerful
analysis capabilities such as evaluation of protein isoforms and filtering by sequence coverage,
number of sequenced peptides etc.
Paver finds and clearly highlights genes and proteins that behave similarly; grouping by function
makes them available for further interpretation and analysis. This allows bio-scientists to find
interesting functional coherencies within biological systems and to discover new patterns never
seen before in their expression data.
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MS Repo tracks samples across the whole protein identification workflow.
Here is the correspondence between spots on a MALDI target and wells on a microtiter plate. |
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Protein hits are presented including Mascot scores, sequence coverage, number of peptides, etc.
Hits can be filtered based on a variety of criteria.
Protein identifications that meet MCP guidelines are
labeled with the "mcp_guidelines" label. |
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Capture data along the whole mass spec workflow
With MS Repo you can capture data along the whole mass spec workflow: location of samples on 2D gels,
microtiter plates, digestion, peak lists, Mascot dat files, and GPS Explorer analyses.
MS Repo is completely web-based with fine-grained access rights control so results can
be shared safely and easily with external collaborators or published on the web. |
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Protein isoforms can be analyzed using an interactive graphical display of peaks (top)
and peptides (bottom).
Peptides that were sequenced are highlighted in green. |
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Final hit list after quality control. The hit list includes attributes such as position on 2D gel,
isoelectric point,
molecular weight, scores, sequence coverage etc.
Hit lists can be exported to Excel and archived together with raw data. |
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Learn more
Just call us at +49 (0) 3834 515230 or send an email to
info@decodon.com
with the subject "MS Repo information request".
We are looking forward to hearing from you!
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